PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1149691g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family NAC
Protein Properties Length: 185aa    MW: 21232.7 Da    PI: 6.7962
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1149691g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM706.3e-2241233128
                 NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdke 91 
                          G+rF P d+elv eyL+++ +g++l+ + +i+e+ d y++ P++Lp +v  +++  y+++ r+       r++r    sgyWk+  k+++
  PDK_30s1149691g001   4 LGVRFVPDDQELV-EYLRHHDAGRTLHSFGAINEAiDPYSFRPEELP-NV--RRDGSYYYADRNA------RNRRtLDGSGYWKSRDKQTK 84 
                         69***********.***********99999999988***********.33..56789***99866......556634569*********** PP

                 NAM  92 vlskkgelvglkktLvfy...kgrapkgektdWvmheyrl 128
                         +++ ++  vg k+ + f    +  +++++ ++W m ey+l
  PDK_30s1149691g001  85 IHT-DSGIVGYKRKFKFClgpSHLNSNSNPSKWKMTEYTL 123
                         **9.9999**********6554456777899*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.6292141IPR003441NAC domain
SuperFamilySSF1019418.89E-244140IPR003441NAC domain
PfamPF023651.5E-145123IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MEALGVRFVP DDQELVEYLR HHDAGRTLHS FGAINEAIDP YSFRPEELPN VRRDGSYYYA  60
DRNARNRRTL DGSGYWKSRD KQTKIHTDSG IVGYKRKFKF CLGPSHLNSN SNPSKWKMTE  120
YTLRPDTSHD TRKALCVIRM TAGNQGNEIR EAIPNPRLPE PDDEDIYGQL SPLLELDDMG  180
SLPSF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026656324.15e-63NAC domain-containing protein 104-like
TrEMBLA0A3Q0HPD41e-61A0A3Q0HPD4_PHODC; NAC domain-containing protein 104-like
STRINGXP_008779809.11e-132(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2942824
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56530.12e-11NAC domain containing protein 64