PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1149851g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family NAC
Protein Properties Length: 138aa    MW: 16125.5 Da    PI: 10.2798
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1149851g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.66.1e-5041303128
                 NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                         pGfrFhPt+eel+++yL++ v gkkl++ ++i ++++y+++Pw+Lp  +k +e+ewyfF++rd+k+++g r+nr+t++g+Wkatg+d+++ 
  PDK_30s1149851g001   4 PGFRFHPTEEELLDFYLRRAVLGKKLQV-DIIGTLNLYRHDPWELPGLAKIGEREWYFFVPRDRKQSNGGRPNRTTEHGFWKATGSDRPIR 93 
                         9***************************.99***************8888899************************************** PP

                 NAM  94 sk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         s+   ++l+glkktLv+y+grap+g+ktdWvm+eyrl
  PDK_30s1149851g001  94 SAadPKRLIGLKKTLVYYEGRAPRGSKTDWVMNEYRL 130
                         98777788***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100551.9152138IPR003441NAC domain
SuperFamilySSF1019413.14E-543135IPR003441NAC domain
PfamPF023655.0E-264130IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    Send to blast
MELPGFRFHP TEEELLDFYL RRAVLGKKLQ VDIIGTLNLY RHDPWELPGL AKIGEREWYF  60
FVPRDRKQSN GGRPNRTTEH GFWKATGSDR PIRSAADPKR LIGLKKTLVY YEGRAPRGSK  120
TDWVMNEYRL PDPTTPPK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-49413017140Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026656011.11e-98NAC domain-containing protein 22-like
SwissprotQ10S659e-82NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A3Q0HMW93e-97A0A3Q0HMW9_PHODC; NAC domain-containing protein 22-like
STRINGXP_008813554.11e-99(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP177038105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-76NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]