PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s1158151g001

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

Nin-like

Protein Properties

Length: 177aa MW: 19692.9 Da PI: 4.8897

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s1158151g001	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	62.2	9.2e-20	130	175	2	47
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhR 47 +k+++ e+l++yF+lp + AA+eLg++lT+LK+ CR+yGI+ WP+ PDK_30s1158151g001 130 TKNMTKEELEQYFDLPRERAAQELGISLTTLKKLCRKYGIPCWPYK 175 89******************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	16.392	120	177	IPR003035	RWP-RK domain
Pfam	PF02042	1.1E-18	132	176	IPR003035	RWP-RK domain
Gene3D	G3DSA:1.10.10.60	1.2E-4	148	169	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence Send to blast
MDDSEPYDPD GDTHRYLYLP ESPSDPLISS GPTFSWEYEL FRLSSPPFPN NDVGLITSNQ 60 AAAPMQANVP SRTIDNNESL IRESDLLPET DFGGSSQLSS AYATGTEGRG AGLTGPKKKK 120 TGIAAQRERT KNMTKEELEQ YFDLPRERAA QELGISLTTL KKLCRKYGIP CWPYKRP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_026657665.1	4e-92	uncharacterized protein LOC113461822, partial
TrEMBL	A0A3Q0HWD8	9e-91	A0A3Q0HWD8_PHODC; uncharacterized protein LOC113461822

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66990.1	1e-11	RWP-RK domain-containing protein