PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1171101g004
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family WRKY
Protein Properties Length: 106aa    MW: 12007.5 Da    PI: 10.6563
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1171101g004genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY34.15.5e-1181101222
                         --SS-EEEEEEE--TT-SS-E CS
                WRKY   2 dDgynWrKYGqKevkgsefpr 22 
                         +D ++WrKYGqK++kgs++pr
  PDK_30s1171101g004  81 SDMWAWRKYGQKPIKGSPYPR 101
                         79******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.1E-971101IPR003657WRKY domain
PROSITE profilePS5081112.85175102IPR003657WRKY domain
SuperFamilySSF1182905.75E-878101IPR003657WRKY domain
PfamPF031062.3E-682101IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    Send to blast
MSETQNVLQE LEELCKPSFP KAQQQSPQSS PSSPPSPAVG DPQQQHSRQP HRPLSQNPRS  60
KRRKNPQKRV VCHVPPDGLS SDMWAWRKYG QKPIKGSPYP RTPADF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008795077.11e-65WRKY transcription factor 22-like isoform X2
TrEMBLA0A2H3Y9783e-64A0A2H3Y978_PHODC; WRKY transcription factor 22-like isoform X2
STRINGXP_008795077.15e-65(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4077323
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.12e-19WRKY DNA-binding protein 27