PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1175051g002
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family WRKY
Protein Properties Length: 527aa    MW: 56540 Da    PI: 6.6338
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1175051g002genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.24.4e-25272326259
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv    +r+aed +++++tYeg+Hnh+
  PDK_30s1175051g002 272 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCPV----QRCAEDRSILITTYEGNHNHP 326
                         7***************************999*95....67999***************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.9E-27256328IPR003657WRKY domain
SuperFamilySSF1182904.84E-23266328IPR003657WRKY domain
PROSITE profilePS5081124.237266328IPR003657WRKY domain
SMARTSM007743.1E-30271327IPR003657WRKY domain
PfamPF031065.3E-21273326IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 527 aa     Download sequence    Send to blast
MDSGDHFPPS IEFPVTLNYR RGDTAEEPPG EKRVDEMDFF SDEKKKKRGR DLDFKVPSLS  60
IKKEDLTIDM RFPYTGLNLL TANTGSDQSM VDDGLSPPED NKEGKSKLSS MQAELVRMKE  120
ENQRLKGVLN QVTTNYNALQ MHLVALMQER TQKNGSSQDH EASDEKTDGK IVPRQFLDLG  180
PAANTDEPSR SSIEGGGWDR SSSPTNNVEA GSMEYRLNKT NREDSPDPSS EGWNPNKASK  240
LASPKSAEQS QEATMRKARV SVRAGSEAPM ITDGCQWRKY GQKMAKGNPC PRAYYRCTMA  300
TGCPVQRCAE DRSILITTYE GNHNHPLPPA AMAMASTTSA AASMLLSGSM SSTEGLINSN  360
FLSRTVLPCS SSMATISASA PFPTVTLDLT HTPNPLQFQR LPAQFQVPFP SGTPAFGAPP  420
QPPSLPQVFG QAPNNQSTFS GLQMSPNMDG AQFPRPKPPS AASLPDTVSA ATAAITADPS  480
FKAALVAAIT SIIGGGHQPN SNNNSSSANA TSSNGNGKPA NSNFLAA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A8e-18258330176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00428DAPTransfer from AT4G04450Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008779787.10.0probable WRKY transcription factor 31 isoform X1
SwissprotQ9XEC31e-133WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A2H3X8010.0A0A2H3X801_PHODC; probable WRKY transcription factor 31 isoform X1
STRINGXP_008779787.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP52653656
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-117WRKY family protein