PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1204661g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family Dof
Protein Properties Length: 322aa    MW: 34363.4 Da    PI: 8.2886
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1204661g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof103.21.6e-325097249
              zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnv 49
                        ++++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrn 
  PDK_30s1204661g001 50 PHQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNA 97
                        67899******************************************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074784.0E-204996IPR003851Zinc finger, Dof-type
PfamPF027017.5E-285297IPR003851Zinc finger, Dof-type
PROSITE profilePS5088424.68954108IPR003851Zinc finger, Dof-type
PROSITE patternPS0136105692IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MIQELLGGVV EERKISIPGS LLIDPSSSST SLSSTSLSSA SSSPSATSEP HQNLRCPRCD  60
SSNTKFCYYN NYNLTQPRHF CKTCRRYWTK GGALRNAKAA PVIAAGASKS GATKAKPSSP  120
DLLARSGISG GLEHELPSSP LFWASPHTSH LMALLRATTV HNPNPNPHSS STLSSVRNKE  180
DGAMMGTHMA ADTVGHALNS QGLSLDPLGQ LPVAPCGSLW RNGNQYAYQQ QPQTQPLQQH  240
SNMLLGEVPS SGIQELYQRF KSSANYCNDQ LQAVMSNVAT TTVGTGTATS IMEPIPLSGG  300
EFTYWNPALT WSDLPTTNGA FP
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAM0843638e-50AM084363.1 Hordeum vulgare subsp. vulgare partial dof15 gene for dof zinc finger protein 15.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008792599.10.0dof zinc finger protein DOF2.2-like
TrEMBLA0A2H3Y2U90.0A0A2H3Y2U9_PHODC; dof zinc finger protein DOF2.2-like
STRINGXP_008792599.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP77103144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.17e-26DOF zinc finger protein 1