PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s65509461g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family SAP
Protein Properties Length: 221aa    MW: 24137.3 Da    PI: 4.7585
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s65509461g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP244.54.1e-752220243454
                  SAP 243 ndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnq 332
                          +dG+lvdfaG gr wvGl+aGvpGr++h+Wdaete+lv+vGGsltdP++v GW mlt+l+ +vGrvr++e  ++va ts+rl v++l ++
  PDK_30s65509461g001   2 EDGTLVDFAGDGRRWVGLFAGVPGRSWHVWDAETEQLVYVGGSLTDPDSVLGWRMLTDLIATVGRVRIAEPGAMVASTSSRLQVMNLDDP 91 
                          79**************************************************************************************** PP

                  SAP 333 gvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenleevcrf....rvrg..aqr..gvlgCvnggyalvyaggvlrvWeiekk 414
                          g v ++ e rr  +v s+da n  ++vvd rG a+v r+ +l+evcrf    rv+g  +qr  g +gC+n gya+v+++g lrvW+  + 
  PDK_30s65509461g001  92 GEVSNQLELRRRALVDSVDACNGQVMVVDLRGLARVLRARTLAEVCRFstvaRVEGhpQQRvsGTVGCMNWGYAVVCSAGSLRVWDAATG 181
                          ************************************************4333355574333225699*******************9996 PP

                  SAP 415 egylyslrervgevnalvaddrhvavsssdgtihlldfga 454
                          e ylys+rervg+v  + a+dr+va   +d+ +hl+dfga
  PDK_30s65509461g001 182 E-YLYSFRERVGDVTIVAASDRYVASWVDDTGLHLWDFGA 220
                          6.*************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF509781.3E-1122217IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.101.4E-1026218IPR015943WD40/YVTN repeat-like-containing domain
PROSITE profilePS502948.597171221IPR017986WD40-repeat-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MEDGTLVDFA GDGRRWVGLF AGVPGRSWHV WDAETEQLVY VGGSLTDPDS VLGWRMLTDL  60
IATVGRVRIA EPGAMVASTS SRLQVMNLDD PGEVSNQLEL RRRALVDSVD ACNGQVMVVD  120
LRGLARVLRA RTLAEVCRFS TVARVEGHPQ QRVSGTVGCM NWGYAVVCSA GSLRVWDAAT  180
GEYLYSFRER VGDVTIVAAS DRYVASWVDD TGLHLWDFGA L
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008778313.11e-155transcriptional regulator STERILE APETALA
TrEMBLA0A2H3X4T71e-153A0A2H3X4T7_PHODC; transcriptional regulator STERILE APETALA
STRINGXP_008778313.11e-154(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1848179
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.19e-60SAP family protein