PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s6550972g004
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family NAC
Protein Properties Length: 224aa    MW: 25038.1 Da    PI: 4.5976
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s6550972g004genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM36.21.8e-11877168
                 NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkky 68
                        +p G+rF+P+d+el+ +yL++ ++ +kl+++ +++ +    ++P+ L +  + +++   wyfF+ +  k+
  PDK_30s6550972g004  8 VPSGIRFRPSDKELIFYYLRPWLRCEKLPCNIIMRLTWNDGTHPEFLTAlyEPAEQGGPWYFFTIEGYKK 77
                        589***************************544555566679*****852233334559****9876665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.8E-12776IPR003441NAC domain
PfamPF023652.9E-8985IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MEEEASKVPS GIRFRPSDKE LIFYYLRPWL RCEKLPCNII MRLTWNDGTH PEFLTALYEP  60
AEQGGPWYFF TIEGYKKAIR VGDWALCKIY SHHSNDADRI IAPTEQHPPM AMSSFSSGFA  120
ALPPYKIGGR HEVQQGSVGL STLDSDRDPS CFAPSFSFPS ILETGTKAHT REVGAVGGEQ  180
CSGSSTQLLD LQAEDVAGPL CHEDDYNLSI TLAELEEFLR EDNQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008805360.12e-86NAC transcription factor 32-like
TrEMBLA0A2H3YYE44e-85A0A2H3YYE4_PHODC; NAC transcription factor 32-like
STRINGXP_008805360.17e-86(Phoenix dactylifera)