PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s662081g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bZIP
Protein Properties Length: 432aa    MW: 45759.5 Da    PI: 5.6881
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s662081g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_154.42.7e-17338385148
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                        e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL++++++L++eN +L+ e
  PDK_30s662081g001 338 ERELKRQRRKQSNRESARRSRLRKQAECEELAQRAESLKEENASLRAE 385
                        89*******************************************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077777.4E-7132159IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165968.0E-40189310No hitNo description
Gene3DG3DSA:1.20.5.1701.6E-15331385No hitNo description
PfamPF001701.9E-15338385IPR004827Basic-leucine zipper domain
SMARTSM003381.1E-13338413IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.634340385IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.06E-8341385No hitNo description
CDDcd147025.39E-23343385No hitNo description
PROSITE patternPS000360345360IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MTPGPTRVRG EIGSRIEVLL RADLSNWVQN LGVSDPEDGL RGGGGGGGEG GGRPRRLRYL  60
ISSFCFNSFV FKRLGMDFGI FADSATWILS FFCGIEPPGS SLHVGSSVLS GSGKWQAVIR  120
LMPNSLELSL REQFMPPYGT PPHPYVMYPP GGLYAHPSIA PGSHPFSPYA MPSPNGHAEA  180
GAVPGGPEMD GKNNNEPGKT SGASANGGFS QSGESGTESS SEGSDANSQN DSQPKTSGGR  240
ESFDETSHRG NPAPGSQNGV TRTLSQAVLS QTIPIMPMPA AGAPSGVAGP TTNLNIGMDY  300
WGAPCSSSLP PMHGKVPANA VAGAVVPGAP SELWMQDERE LKRQRRKQSN RESARRSRLR  360
KQAECEELAQ RAESLKEENA SLRAEERLGE IPQGTDNPQL ERDEQNSGDD NNKRHLDSDA  420
QAGEKDPVQS GL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14052RGGGGGGGEGGGR
2354360RRSRLRK
3354361RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008810162.10.0bZIP transcription factor 16-like isoform X2
SwissprotQ501B26e-92BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A2H3Z9F60.0A0A2H3Z9F6_PHODC; bZIP transcription factor 16-like isoform X2
STRINGXP_008810162.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-67basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]