PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s668601g006

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

VOZ

Protein Properties

Length: 180aa MW: 21058.6 Da PI: 9.567

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s668601g006	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	238.1	1.7e-73	1	123	95	217
VOZ 95 lfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrle 186 lfdls+lege++rewlffdkprrafesgnrkqrslpdy grgwhesrkqvmkefgglkrsyymdpqp+++fewhl+eyei+++d+lalyrle PDK_30s668601g006 1 LFDLSVLEGESLREWLFFDKPRRAFESGNRKQRSLPDYCGRGWHESRKQVMKEFGGLKRSYYMDPQPLTHFEWHLFEYEISNCDDLALYRLE 92 8***************************************************************************************** PP VOZ 187 lklvdekksakgkvskdsladlqkklgrlta 217 +klvd+kksa++k++++sl dlq+++grl+a PDK_30s668601g006 93 FKLVDAKKSARAKLTSNSLLDLQQQMGRLNA 123 **************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence Send to blast
LFDLSVLEGE SLREWLFFDK PRRAFESGNR KQRSLPDYCG RGWHESRKQV MKEFGGLKRS 60 YYMDPQPLTH FEWHLFEYEI SNCDDLALYR LEFKLVDAKK SARAKLTSNS LLDLQQQMGR 120 LNAENSVDNK KNGKSRTKAN QKDIAENIYS TPNTANQKEN EINLGHPQHE RNHRGKVLGQ

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008798279.1	1e-115	transcription factor VOZ1 isoform X1
Refseq	XP_008798281.1	1e-116	transcription factor VOZ1 isoform X3
Refseq	XP_008798282.1	1e-116	transcription factor VOZ1 isoform X4
Swissprot	Q9SGQ0	5e-69	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A2H3YG35	1e-114	A0A2H3YG35_PHODC; transcription factor VOZ1 isoform X3
TrEMBL	A0A2H3YGG0	1e-114	A0A2H3YGG0_PHODC; transcription factor VOZ1 isoform X1
TrEMBL	A0A2H3YGR3	1e-114	A0A2H3YGR3_PHODC; transcription factor VOZ1 isoform X4
STRING	XP_008798279.1	1e-115	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2343	38	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	2e-71	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]