PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s669181g002
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family WRKY
Protein Properties Length: 154aa    MW: 17594.1 Da    PI: 10.6445
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s669181g002genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY32.41.9e-1099119121
                        ---SS-EEEEEEE--TT-SS- CS
               WRKY   1 ldDgynWrKYGqKevkgsefp 21 
                        ldDgy+WrKYGqK vk+++f+
  PDK_30s669181g002  99 LDDGYRWRKYGQKAVKNNKFS 119
                        59****************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-1184118IPR003657WRKY domain
SuperFamilySSF1182901.14E-891119IPR003657WRKY domain
PROSITE profilePS5081111.24494116IPR003657WRKY domain
SMARTSM007744.3E-599135IPR003657WRKY domain
PfamPF031061.3E-6100119IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
MEEYGVPIPL QPSSSHLTLF SANTFTPQPV STKHHTNNSS GLLGWNETAK AQVLDDHGVP  60
RREILIGSEA ERKPATKKRE KKVRTPRYAF QTRSQVDILD DGYRWRKYGQ KAVKNNKFSS  120
VKPLPNMLSM HNSTPQFIDF KINFDPLVFL KRLG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008779030.11e-84probable WRKY transcription factor 75
RefseqXP_008813482.11e-84probable WRKY transcription factor 75
TrEMBLA0A2H3X6E82e-83A0A2H3X6E8_PHODC; probable WRKY transcription factor 75
STRINGXP_008779030.14e-84(Phoenix dactylifera)
STRINGXP_008813482.14e-84(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.11e-18WRKY DNA-binding protein 75