PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s670321g008

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

bHLH

Protein Properties

Length: 203aa MW: 22507.6 Da PI: 10.5809

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s670321g008	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	21	6.1e-07	110	138	5	33
HHHHHHHHHHHHHHHHHHHHCTSCCC... CS HLH 5 hnerErrRRdriNsafeeLrellPkaska 33 h+++Er RR+ri +++ L+el+P+ k+ PDK_30s670321g008 110 HSIAERLRRERIAERMRALQELVPSTNKT 138 99***********************6333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	3.66E-7	103	139	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	9.636	105	180	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.8E-6	109	137	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	2.3E-4	110	139	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence Send to blast
MVLSREGGSG AGGTSGFPLG LSLERGSGSG KRLREESEAK VERDPVQLTG LFPPGFGHLQ 60 SHQIRPNPPA PTPPQTFHGQ AKQGGVAAGS QPPAPRPKVR ARRGQATDPH SIAERLRRER 120 IAERMRALQE LVPSTNKTRD RHYSTFFCYA LFPVIVLGAD MSSQELYNML VHIHVYERQI 180 RLRFILKNSS GIIYLYGENN LQE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	114	119	RLRRER

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_026660027.1	3e-93	transcription factor UNE12 isoform X1
TrEMBL	A0A3Q0I3B5	7e-92	A0A3Q0I3B5_PHODC; transcription factor UNE12 isoform X1
STRING	XP_008788137.1	1e-92	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2656	35	80