PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s688311g005
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family HB-other
Protein Properties Length: 147aa    MW: 16597.5 Da    PI: 4.7188
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s688311g005genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox31.92.2e-1071117248
                        T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHH CS
           Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWF 48 
                         kR ++++e + +Lee+F++n++++ +e++eL +kl+L  rqV +++
  PDK_30s688311g005  71 PKRLRLSPEKTWVLEEAFNRNPTLDSTEKAELCAKLNLLPRQVENYY 117
                        6899***************************************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.8E-1062117IPR009057Homeodomain-like
PROSITE profilePS500718.56867117IPR001356Homeobox domain
SuperFamilySSF466894.28E-968117IPR009057Homeodomain-like
SMARTSM003890.00369126IPR001356Homeobox domain
PfamPF000461.2E-771117IPR001356Homeobox domain
CDDcd000866.63E-972115No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MANLGKGPST PNLTTTFLGS SSPSRSVQRE GTSSQNMRDI DINLPPPEAE EEIPIGGMDD  60
TVQEENNIPK PKRLRLSPEK TWVLEEAFNR NPTLDSTEKA ELCAKLNLLP RQVENYYYWG  120
HFCKDMMMDA ARNPRSDSHR ETIGFAE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010905884.15e-25homeobox-leucine zipper protein HOX3-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17460.11e-08Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein