PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s691231g002
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family WOX
Protein Properties Length: 138aa    MW: 15330.2 Da    PI: 9.9353
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s691231g002genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox47.62.8e-152501457
                       HHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
           Homeobox 14 eLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                       +Le+l+++  r+p+a+++e+++++l    +++ ++V++WFqN++a+e++
  PDK_30s691231g002  2 ALEALYRSgMRTPNAHQIERITAELgkygRIEGKNVFYWFQNHKARERQ 50
                       7******99**************************************97 PP
2Wus_type_Homeobox93.32.2e-302521565
  Wus_type_Homeobox 15 iLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                        Le+ly+sG+rtPn+++i+ritaeL +yG+ie+kNVfyWFQN+kaRerqk+
  PDK_30s691231g002  2 ALEALYRSGMRTPNAHQIERITAELGKYGRIEGKNVFYWFQNHKARERQKK 52
                       59***********************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500719.977151IPR001356Homeobox domain
PfamPF000465.9E-13250IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.6E-5250IPR009057Homeodomain-like
SuperFamilySSF466894.03E-9255IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    Send to blast
MALEALYRSG MRTPNAHQIE RITAELGKYG RIEGKNVFYW FQNHKARERQ KKRLTADISS  60
TTSTSSSNSS TCPPIIALKS TGSRGGRVGG GEAEEYYDGS CKRKCRSWGG VGRDIMEEGG  120
GDRTLELFPL HPEGKQMR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18490GGRVGGG
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor which may be involved in developmental processes. {ECO:0000250}.
UniProtTranscription factor which may be involved in developmental processes. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019702877.12e-68WUSCHEL-related homeobox 4 isoform X1
SwissprotQ25AM21e-37WOX4_ORYSI; WUSCHEL-related homeobox 4
SwissprotQ7XTV31e-37WOX4_ORYSJ; WUSCHEL-related homeobox 4
TrEMBLA0A2H3X5K97e-58A0A2H3X5K9_PHODC; WUSCHEL-related homeobox 4
STRINGXP_008778641.11e-58(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP126923035
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46480.16e-32WUSCHEL related homeobox 4