PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s701911g003
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family G2-like
Protein Properties Length: 138aa    MW: 15580.6 Da    PI: 7.0442
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s701911g003genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like65.21.2e-2076122451
            G2-like   4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                        ++WtpeLH+rFve+veqL G++kA+P++ilelm++++Lt+++v+  LQ
  PDK_30s701911g003  76 VDWTPELHRRFVEVVEQL-GIDKAVPSRILELMGIDCLTRHNVARDLQ 122
                        78****************.*************************9999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.0E-1875122IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-1875123IPR006447Myb domain, plants
SuperFamilySSF466892.15E-1176122IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    Send to blast
MVMRETRRWE AAGHPQKNSA TDSWEGTSSG TSTLMTSSPG TCCPTRRWTL RRSSRRSPFL  60
MTHEEESGTA TAVVEVDWTP ELHRRFVEVV EQLGIDKAVP SRILELMGID CLTRHNVARD  120
LQVPSLQATF LTSDKLEH
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP24153886
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20570.12e-24GBF's pro-rich region-interacting factor 1