PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s704841g004

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

bZIP

Protein Properties

Length: 364aa MW: 40596 Da PI: 6.7338

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s704841g004	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37.7	4.6e-12	224	282	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr +r NR +A rs +RK ++i+eLe kv+ L++e ++L +l l++ +a l+s++ PDK_30s704841g004 224 KRVKRILANRQSAARSKERKFKYIAELEHKVQILKTEATTLSAQLTLLQNDSAGLTSQN 282 8999***************************************************9998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.6E-17	220	284	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.266	222	285	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	7.4E-11	224	282	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.74E-11	224	275	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.9E-11	224	281	No hit	No description
CDD	cd14703	6.12E-23	225	276	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence Send to blast
MLLPPLAIID FWLKLGYVKE ERIEEEEKWK MLLVKLEHDW DWCTNAKGAG DKKLEGDSGD 60 DLFNAYLDLD SLDTLDSSED KREDLNSRAS GTKTNGDSSE NEAESSVNEG GGRGVKFPPH 120 HSPLVETTEG TKHSAAGDPG HIGTSNRHCM RLSMDGSIGR LNFGEDSPKL PPSPGFLTAQ 180 TGNLKDGASN VFSLEFGNGE FSPAEMKKIA ANEKLAEMAL MDPKRVKRIL ANRQSAARSK 240 ERKFKYIAEL EHKVQILKTE ATTLSAQLTL LQNDSAGLTS QNNELKFRLQ AMEQQAQLRD 300 DIEKKSGLVY EVLAIAGSRK GLLFLHMEKL FPYFNPVTLR SKWSNMTIAS KITLNYKYKN 360 PMKN

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence Send to blast

MLLPPLAIID FWLKLGYVKE ERIEEEEKWK MLLVKLEHDW DWCTNAKGAG DKKLEGDSGD  60
DLFNAYLDLD SLDTLDSSED KREDLNSRAS GTKTNGDSSE NEAESSVNEG GGRGVKFPPH  120
HSPLVETTEG TKHSAAGDPG HIGTSNRHCM RLSMDGSIGR LNFGEDSPKL PPSPGFLTAQ  180
TGNLKDGASN VFSLEFGNGE FSPAEMKKIA ANEKLAEMAL MDPKRVKRIL ANRQSAARSK  240
ERKFKYIAEL EHKVQILKTE ATTLSAQLTL LQNDSAGLTS QNNELKFRLQ AMEQQAQLRD  300
DIEKKSGLVY EVLAIAGSRK GLLFLHMEKL FPYFNPVTLR SKWSNMTIAS KITLNYKYKN  360
PMKN

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008780305.1	0.0	transcription factor RF2a-like
TrEMBL	A0A2H3X9E9	0.0	A0A2H3X9E9_PHODC; transcription factor RF2a-like
STRING	XP_008780305.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6247	36	50

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	1e-57	bZIP family protein