PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s707401g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family GATA
Protein Properties Length: 138aa    MW: 15119.3 Da    PI: 11.0272
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s707401g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.42.7e-202054135
               GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                       C+ C+ttkTplWR gp+g+k+LCnaCG++yrkk++
  PDK_30s707401g001 20 CADCRTTKTPLWRGGPSGPKSLCNACGIRYRKKRR 54
                       ********************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004018.4E-181465IPR000679Zinc finger, GATA-type
PROSITE profilePS5011413.1781450IPR000679Zinc finger, GATA-type
SuperFamilySSF577164.23E-141455No hitNo description
Gene3DG3DSA:3.30.50.101.3E-161854IPR013088Zinc finger, NHR/GATA-type
CDDcd002021.73E-131954No hitNo description
PfamPF003205.0E-182054IPR000679Zinc finger, GATA-type
PROSITE patternPS0034402045IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    Send to blast
ETGSIDLSGG REGSGEPKSC ADCRTTKTPL WRGGPSGPKS LCNACGIRYR KKRRAVLGHK  60
EGERRERKQK REDDSSSSTT TTTTKELGGV SVKLRMLGLG SEVLVKRRSM LDRKRRRMGE  120
VEQAAVLLMA LSSGFLHA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112116RKRRR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00335DAPTransfer from AT3G06740Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008797161.11e-93GATA transcription factor 15-like
TrEMBLA0A2H3YDU73e-92A0A2H3YDU7_PHODC; GATA transcription factor 15-like
STRINGXP_008797161.14e-93(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP24183892
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.15e-29GATA transcription factor 15