PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s730711g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bHLH
Protein Properties Length: 321aa    MW: 35333 Da    PI: 5.0969
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s730711g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH57.42.6e-1855104255
                        HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        r +h++ E+rRR++iN++f+ Lrel+P++    ++K +Ka+ L +++eYI+ Lq
  PDK_30s730711g001  55 RSKHSATEQRRRSKINDRFQILRELIPHS----DQKRDKASFLLEVIEYIRFLQ 104
                        889*************************9....9*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.0E-2450127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-1951123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.01553103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.78E-1755108No hitNo description
PfamPF000101.0E-1555104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-1359109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MESASRSSKG FDDEDDEEEE FGKREGSSSH KAELTMKVDG KGKGGDNDQR PNTPRSKHSA  60
TEQRRRSKIN DRFQILRELI PHSDQKRDKA SFLLEVIEYI RFLQEKVQKY ESSYPAWSQD  120
NAKLMPWVKV YFRSFWKNAR NNNQSSGDGI SDPSGSAPPG YMFSGSDNSI PVAPAMISTA  180
QNPTDSDMAA GLSYKAMETP TNFANNVTTQ IQPQWLRSSG SADCAVSGET LNEQELTIDE  240
GTISMSSAYS QGLLTTLTQA LQSSGIDLSQ ATLSVQINLG KRAINKRPAA TVTTSGAKVY  300
ALSSDEFCDL YLFLSVQIST N
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00219DAPTransfer from AT1G69010Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008788922.10.0transcription factor BIM2 isoform X5
TrEMBLA0A2H3XUF10.0A0A2H3XUF1_PHODC; transcription factor BIM2 isoform X5
STRINGXP_008788920.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76237128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.11e-56BES1-interacting Myc-like protein 2