PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s730791g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family Dof
Protein Properties Length: 312aa    MW: 33513.3 Da    PI: 8.7306
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s730791g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof105.23.6e-333482250
             zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvP 50
                       +e+ lkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP
  PDK_30s730791g001 34 PEQGLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVP 82
                       67899******************************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-213082IPR003851Zinc finger, Dof-type
PfamPF027012.3E-283685IPR003851Zinc finger, Dof-type
PROSITE profilePS5088425.5463892IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104076IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010052Biological Processguard cell differentiation
GO:0010118Biological Processstomatal movement
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:1902066Biological Processregulation of cell wall pectin metabolic process
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MAEVVGHSPL ADGKLRGRGR KTTTTTTTIP LRPPEQGLKC PRCDSPNTKF CYYNNYSLTQ  60
PRHFCKTCRR YWTKGGALRN VPGCGLKFLT GPSQPAVDFQ LGVLPFSRLQ LPTTSGVFSS  120
NNNQFFSLAD FSSATANSSP AVPTTSSMVG FNYPISSVGF YGEMGGAPSS IVSSNTHGSI  180
ASSIESLSSI NQDLHWKLQQ QRLAMFFGVE AHKESTLSAL PTPLLEKQSE HISFQVPDSA  240
GAQDCGGSGS RKGCIGNTET TARFLESSYT MPASATTNSY NNNNTSSSGN NNSSNWSGIP  300
AWNDMPQFTT LP
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJN3937194e-33JN393719.1 Sorghum bicolor clone Sbdof25 Dof (Dof) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010909355.21e-161dof zinc finger protein DOF5.7-like
TrEMBLA0A2H3Z9I31e-136A0A2H3Z9I3_PHODC; dof zinc finger protein DOF5.7
STRINGXP_008810154.11e-136(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP14037367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65590.17e-38Dof family protein