PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s731031g002
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family ERF
Protein Properties Length: 192aa    MW: 21902.8 Da    PI: 4.8638
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s731031g002genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.86.3e-14117164755
                AP2   7 rwdkkrgrWvAeIrdpseng.kr..krfslgkfgtaeeAakaaiaarkkleg 55 
                        r ++k+g+W A+I  +   g  r  k ++lg+f+t+eeAa+a++ a+ +l+g
  PDK_30s731031g002 117 R-RRKDGKWQARIGRV---GeSRdaKDIYLGTFDTEEEAAEAYDIAAIELRG 164
                        4.5559*******998...443347*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.8E-8134IPR001471AP2/ERF domain
SuperFamilySSF541713.47E-6133IPR016177DNA-binding domain
PROSITE profilePS5103211.561133IPR001471AP2/ERF domain
SMARTSM003800.067239IPR001471AP2/ERF domain
PROSITE profilePS5103217.57109172IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-16117172IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-15117174IPR016177DNA-binding domain
CDDcd000187.25E-21117174No hitNo description
PfamPF008472.4E-8117164IPR001471AP2/ERF domain
SMARTSM003801.1E-21117178IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MGSYDSEEKA ARAHDLAALK YWGPSTNAKL NFPEIIYVNS SLDFLHVRMT LLVSFLDPQV  60
SDYEKELETM KTMSQEEYVA YKKQLFLKGS IDLQRSDEVD TNQICRPITL GGAFWLRRRK  120
DGKWQARIGR VGESRDAKDI YLGTFDTEEE AAEAYDIAAI ELRGVHAVTN FDISNYCEGG  180
LRRLEGPCKL EM
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008808053.11e-81AP2-like ethylene-responsive transcription factor AIL1
TrEMBLA0A2H3Z4073e-80A0A2H3Z407_PHODC; AP2-like ethylene-responsive transcription factor AIL1
STRINGXP_008808053.16e-81(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP78643548
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.16e-28AP2 family protein