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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PDK_30s731461g003 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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| Family | bZIP | ||||||||
| Protein Properties | Length: 231aa MW: 26129.9 Da PI: 9.1657 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 42.9 | 1e-13 | 153 | 196 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48
+r++r++kNRe+A rsR+RK+a++ +Le++v +L++ k+Lkk+
PDK_30s731461g003 153 RRQKRMIKNRESAARSRARKQAYLHQLEQEVRQLSNTIKRLKKQ 196
69*************************************99975 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SMART | SM00338 | 1.4E-9 | 148 | 212 | IPR004827 | Basic-leucine zipper domain |
| PROSITE profile | PS50217 | 10.105 | 151 | 196 | IPR004827 | Basic-leucine zipper domain |
| SuperFamily | SSF57959 | 7.74E-11 | 153 | 197 | No hit | No description |
| CDD | cd14707 | 1.64E-19 | 153 | 197 | No hit | No description |
| Pfam | PF00170 | 5.3E-11 | 153 | 196 | IPR004827 | Basic-leucine zipper domain |
| Gene3D | G3DSA:1.20.5.170 | 9.8E-14 | 153 | 196 | No hit | No description |
| PROSITE pattern | PS00036 | 0 | 156 | 171 | IPR004827 | Basic-leucine zipper domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 231 aa Download sequence Send to blast |
MVSPNGGQGL QCPPPFLKQG SVYNLTLDEV PCHLPELGEP LNAMNLDQPL NSVMTMEQQI 60 HAPSSSSLSS TSIPRLLPRN YNMNFILCNT NVDGAWQEII QQQEQGSAEG FNENQQMGLP 120 MGSMMMARPT SSDSQTATEA YGPDEIVDRN IERRQKRMIK NRESAARSRA RKQAYLHQLE 180 QEVRQLSNTI KRLKKQKMLP HFLIELMLII GRRDAIAFKY TFRAKIPTTA N |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_026659821.1 | 8e-62 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
| Refseq | XP_026659822.1 | 8e-62 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
| TrEMBL | A0A3Q0HYZ8 | 2e-60 | A0A3Q0HYZ8_PHODC; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
| STRING | XP_008787569.1 | 5e-61 | (Phoenix dactylifera) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Monocots | OGMP25478 | 3 | 5 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G56850.1 | 5e-18 | ABA-responsive element binding protein 3 | ||||




