PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s731461g006
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bZIP
Protein Properties Length: 239aa    MW: 27047.9 Da    PI: 9.7642
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s731461g006genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.31.2e-11112155346
                        XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                          k+ rr+++NReAAr+sR+RKk +i++Le  + +L++  ++L 
  PDK_30s731461g006 112 TFKVLRRLAQNREAARKSRLRKKVYIQQLEASSMKLTQLEQELE 155
                        57999***************************999998887664 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.2E-5110174IPR004827Basic-leucine zipper domain
PfamPF001709.7E-9111155IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.691112156IPR004827Basic-leucine zipper domain
CDDcd147081.32E-23114163No hitNo description
SuperFamilySSF579591.69E-7114156No hitNo description
Gene3DG3DSA:1.20.5.1705.0E-9116158No hitNo description
PROSITE patternPS000360117132IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MDIYEHNHQI SMWDDSFGAD SSQYSGSSTV MEADVKIDSG FENIPHRTLG PPKKYNQEAN  60
KPGDKLVPDV PYQYRWAPVS VRQAYRTSIG GYRYRYASVD KIGVRSIKTI KTFKVLRRLA  120
QNREAARKSR LRKKVYIQQL EASSMKLTQL EQELERARQQ GVYTREHSGD SFLGSSGAVD  180
SVELLFVTIN HHINSEPFSM GPLGLAKVVF STSGIPMLVD IVYVSCARLV MFCKVKDTI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008808847.22e-81transcription factor TGA4-like isoform X1
RefseqXP_026665662.12e-81transcription factor TGA4-like isoform X1
RefseqXP_026665663.18e-82transcription factor TGA4-like isoform X2
TrEMBLA0A2H3Z5U94e-80A0A2H3Z5U9_PHODC; transcription factor TGA4-like isoform X1
TrEMBLA0A3Q0IF842e-80A0A3Q0IF84_PHODC; transcription factor TGA4-like isoform X2
STRINGXP_008808847.14e-81(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10030.24e-18TGACG motif-binding factor 4