PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s736821g004
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family ERF
Protein Properties Length: 180aa    MW: 20038.7 Da    PI: 9.528
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s736821g004genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.3e-174392255
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                       +ykGVr ++ +g+Wv+eIr p     +  +r++lg++ t+e Aa+a++aa ++l+g
  PDK_30s736821g004 43 QYKGVRMRS-WGSWVSEIRAP-----HqkTRIWLGSYSTPEAAARAYDAALLCLKG 92
                       6*****998.**********7.....335************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.5E-3042101IPR001471AP2/ERF domain
PfamPF008479.2E-114392IPR001471AP2/ERF domain
SMARTSM003809.9E-3443106IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-2043102IPR016177DNA-binding domain
PROSITE profilePS5103221.75943100IPR001471AP2/ERF domain
CDDcd000181.69E-2043102No hitNo description
PRINTSPR003671.1E-84455IPR001471AP2/ERF domain
PRINTSPR003671.1E-86682IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0034605Biological Processcellular response to heat
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MVKRSSSSSS SRVLDTSNSS IPPPNHTTTT KLRPKDEGIR KRQYKGVRMR SWGSWVSEIR  60
APHQKTRIWL GSYSTPEAAA RAYDAALLCL KGSSAALNFP TSLPYHPAPN TVMSPKSIQR  120
VAAPPRTPSN SCMASTIEDK SWIDFGAFQS PKLMDQMISP LISSWEELDE EGDFELWSFC
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00156DAPTransfer from AT1G21910Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008802060.11e-106ethylene-responsive transcription factor ERF014-like
TrEMBLA0A2H3YPZ51e-105A0A2H3YPZ5_PHODC; ethylene-responsive transcription factor ERF014-like
STRINGXP_008802060.11e-105(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31973469
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.12e-32ERF family protein