PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s744691g001

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

bZIP

Protein Properties

Length: 225aa MW: 25116 Da PI: 9.0199

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s744691g001	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	27.5	7e-09	156	210	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvke..LeaeNkaLkkeleelkkeva 57 kr rr NR +A rs +RK +i+eLe+k ++ L+++N +Lk +l+ ++++++ PDK_30s744691g001 156 KRVRRILANRQSAARSKERKMRYIAELEQKRDStgLTSQNNELKFRLQAMEQQAQ 210 899*************************88666************999987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.0E-7	152	217	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.7E-7	156	211	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.6E-8	156	210	No hit	No description
SuperFamily	SSF57959	4.82E-8	156	209	No hit	No description
CDD	cd14703	3.05E-15	157	208	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence Send to blast
MNLDSLDALN SSGTEEKRED LDSRASGTKM NEADSDNEAE SSVNESGGSE QFRTPSTKKK 60 ERIKRSSPVD PSPINSRHCR SISMDSFMGK LHLGDESSKL PPSLGNQMGQ QSRSGSMDGT 120 GSTFSLEFGN GEFSAAEMKK ITANEKLAEM VLTDPKRVRR ILANRQSAAR SKERKMRYIA 180 ELEQKRDSTG LTSQNNELKF RLQAMEQQAQ LRDGNLLYYS IKFIF

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008776338.2	1e-146	probable transcription factor PosF21, partial
TrEMBL	A0A2H3X061	1e-145	A0A2H3X061_PHODC; probable transcription factor PosF21
STRING	XP_008776338.1	1e-146	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6247	36	50

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	1e-68	bZIP family protein