PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s758201g003
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family NAC
Protein Properties Length: 339aa    MW: 39089.5 Da    PI: 9.2073
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s758201g003genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM639.1e-2041341128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkya..tgkrknr.atksgyWkatg 87 
                        lp GfrF Ptd+e++  yL+  v+  + l++  +i e d+ +++ ++ p  ++ ++  ++y+++    ++a  + +r +r +  +g+Wk+t 
  PDK_30s758201g003   4 LPLGFRFLPTDQEIL-SYLRFYVDVGQpLHC-GFIVEEDLRYFQVEQPPdVRMPGSLGRLYYYIDCFYREAsgRPTRDRRtVDGRGIWKSTD 93 
                        699***********9.9******98873555.889999999986665553345555567888877666555114568888455599****** PP

                NAM  88 kdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128
                         +k++++ ++e vg+k+ + f +   + + ++t+Wvm ey+l
  PDK_30s758201g003  94 GQKTIHQ-SSEIVGCKQDFRFRRLkASGEEVSTTWVMTEYTL 134
                        *****99.999**********97614456679********98 PP
2NAM34.56.2e-112353381102
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkya..tgkrknr.atksgyWkatgk 88 
                        lp Gf+F Ptd+e++  yL+  v+  + +   +i e d+ +++ ++ p  +++++  ++y++++   ++   + +r +r +  +g+Wk+t  
  PDK_30s758201g003 235 LPLGFHFLPTDQEIL-SYLRFYVDVGQPPHYGFIVEEDLRYFQVEQPPdVRMSGSLGRLYYYINCFYRQVsgRPTRDRRtVDGRGIWKSTDG 325
                        699***********9.9*******999999899*****99997666653345555557787776655555115568888455599******9 PP

                NAM  89 dkevlskkgelvgl 102
                        +k +++ +++  g 
  PDK_30s758201g003 326 QKIIYE-SSKILGY 338
                        999998.6666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.14E-253144IPR003441NAC domain
PROSITE profilePS5100522.2254158IPR003441NAC domain
PfamPF023659.9E-135134IPR003441NAC domain
SuperFamilySSF1019415.62E-15231339IPR003441NAC domain
PROSITE profilePS5100516.32235339IPR003441NAC domain
PfamPF023651.1E-4236331IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MEVLPLGFRF LPTDQEILSY LRFYVDVGQP LHCGFIVEED LRYFQVEQPP DVRMPGSLGR  60
LYYYIDCFYR EASGRPTRDR RTVDGRGIWK STDGQKTIHQ SSEIVGCKQD FRFRRLKASG  120
EEVSTTWVMT EYTLHSSRSN NNSMGTPARK ELCSPGGDGM RVVRDRAGLS FERVVLEGAR  180
PLTREPTPFH RQREEGHKCC SLSLPGKRKS GGDRVLPLII YSPGSSCRKA KMEVLPLGFH  240
FLPTDQEILS YLRFYVDVGQ PPHYGFIVEE DLRYFQVEQP PDVRMSGSLG RLYYYINCFY  300
RQVSGRPTRD RRTVDGRGIW KSTDGQKIIY ESSKILGYK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGXP_008780765.11e-68(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2106124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32870.12e-12NAC domain protein 13