PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s761451g004
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bHLH
Protein Properties Length: 342aa    MW: 36662.1 Da    PI: 8.9166
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s761451g004genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.86.2e-06292317630
                        HHHHHHHHHHHHHHHHHHHCTSCC.C CS
                HLH   6 nerErrRRdriNsafeeLrellPk.a 30 
                        +++Er RR ri +++ +L+el+P+ +
  PDK_30s761451g004 292 SIAERVRRTRISERMRKLQELVPNmD 317
                        689********************955 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.867286342IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.32E-6289322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000830.00114290326No hitNo description
Gene3DG3DSA:4.10.280.104.1E-5291321IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048573Biological Processphotoperiodism, flowering
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MMFGSPPTAA EKDLKVPYLA ATAPFNHTKE ESDILHGQQQ QQQQMSSGLL RYRSAPSSLQ  60
QQQQLPSPSP VESSYRVVSS MAMEAEQMKT AAGAAVGGDG GNCFNLIRHS SSPAGFFSRF  120
DVENGYAMMR GITGFSNGNG SMGDGTNPPK GQISFSSRQN SSAGLMSQIS EIGSECMGGR  180
SPEDGNLGVG NGGGRCYMPG FPAASWDDSP LLSDNYSGLK RAREAEGKMT AGLNPSNPQN  240
GDIRSHASGL THHFSLPKTS SEMAAIEKFI QFQDAVPCKI RAKRGCATHP RSIAERVRRT  300
RISERMRKLQ ELVPNMDKTL SETRASCTCS ASKQKPCPNP AV
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00646PBMTransfer from LOC_Os08g39630Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008795725.11e-177transcription factor bHLH130-like
TrEMBLA0A2H3YA871e-176A0A2H3YA87_PHODC; transcription factor bHLH130-like
STRINGXP_008795725.11e-176(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP188438103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.11e-53bHLH family protein