PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s762951g001

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

NAC

Protein Properties

Length: 250aa MW: 28786.6 Da PI: 9.4822

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s762951g001	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	108.6	7.5e-34	12	85	54	128
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ ewyfFs+rd+ky++g+r+nrat+ gyWkatgkd++v s ++++vg+kktLv+y+grap+g++tdWvmheyrl PDK_30s762951g001 12 NDLEWYFFSPRDRKYPNGSRTNRATQGGYWKATGKDRKVSS-QRRAVGMKKTLVYYRGRAPHGSRTDWVMHEYRL 85 5669**********************************9.8999*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	36.071	1	115	IPR003441	NAC domain
SuperFamily	SSF101941	6.41E-36	10	91	IPR003441	NAC domain
Pfam	PF02365	9.1E-17	16	85	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence Send to blast
MIISEKSFLP SNDLEWYFFS PRDRKYPNGS RTNRATQGGY WKATGKDRKV SSQRRAVGMK 60 KTLVYYRGRA PHGSRTDWVM HEYRLDEKEC ETAFGLQNEG QQEKRFYVVE WTVSEDDSAL 120 ENIETVRQLF RVALLPADRA KIQAMSLNQF LESTRLSAVR HLHEIETLIS IGADYKGRAH 180 RSLRAQEEAE KKAAELELQK KELLLRLGAT EDEIQIVAAE LKEEKLDQSC GPPRLAWPRR 240 GPCSSPASRK

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	8e-31	15	87	72	144	NO APICAL MERISTEM PROTEIN
1ut4_B	8e-31	15	87	72	144	NO APICAL MERISTEM PROTEIN
1ut7_A	8e-31	15	87	72	144	NO APICAL MERISTEM PROTEIN
1ut7_B	8e-31	15	87	72	144	NO APICAL MERISTEM PROTEIN
3swm_A	7e-31	15	87	75	147	NAC domain-containing protein 19
3swm_B	7e-31	15	87	75	147	NAC domain-containing protein 19
3swm_C	7e-31	15	87	75	147	NAC domain-containing protein 19
3swm_D	7e-31	15	87	75	147	NAC domain-containing protein 19
3swp_A	7e-31	15	87	75	147	NAC domain-containing protein 19
3swp_B	7e-31	15	87	75	147	NAC domain-containing protein 19
3swp_C	7e-31	15	87	75	147	NAC domain-containing protein 19
3swp_D	7e-31	15	87	75	147	NAC domain-containing protein 19
4dul_A	8e-31	15	87	72	144	NAC domain-containing protein 19
4dul_B	8e-31	15	87	72	144	NAC domain-containing protein 19

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	5e-52	NAC domain containing protein 57