PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s765181g004
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bHLH
Protein Properties Length: 241aa    MW: 26853.9 Da    PI: 10.1373
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s765181g004genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.81.6e-1266112354
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        + h+e+ErrRR+riN  +++Lr+++P a      K++Ka+ L  ++e +k+L
  PDK_30s765181g004  66 KIHSEAERRRRERINAHLSTLRRMIPDA-----DKMDKASLLGSVIEQVKDL 112
                        66*************************9.....8*************99988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.32663112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.5E-1464118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-1365118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.5E-1066112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.4E-1269118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048731.68E-7149216No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MAQYFPPYGW SQEGKKRISL PSLYKGSLLL PRPTSSAPPF LDFGASYPSS SSVTGRSATA  60
ARALKKIHSE AERRRRERIN AHLSTLRRMI PDADKMDKAS LLGSVIEQVK DLKRKASAIG  120
KGFQVPTEVN EVTVECKEGN GHLYIIRASI CCEDRPDLFT DLIQAFHGLS LRTIRADMTS  180
LGGRVKNVFI LYRKEGNAGM CLSSLKESIE EALSRVVSPD MVSTNVFPSK RQRLLESHYY  240
S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17176ERRRRE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008792668.11e-179transcription factor bHLH51-like
TrEMBLA0A2H3Y3J81e-178A0A2H3Y3J8_PHODC; transcription factor bHLH51-like
STRINGXP_008792668.11e-178(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33473678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.11e-39bHLH family protein