PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s769251g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family GeBP
Protein Properties Length: 107aa    MW: 12000.9 Da    PI: 11.722
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s769251g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57339.91.2e-121588277
             DUF573  2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgke 77
                       +fqr w  eDei++L++l+d  +k g  ps      + f+++s+ +++s+ ql  K++rL++   +   ++k++k+
  PDK_30s769251g001 15 AFQRSWLPEDEITILRALLDNSSKDGLLPSPRQR--HLFMRSSLRLQASDGQLACKVQRLRRSCGNAAVDMKKKKN 88
                       69************************99888655..55799********************998777666444443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.8E-111690IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    Send to blast
MSMAAGRRRR QPHPAFQRSW LPEDEITILR ALLDNSSKDG LLPSPRQRHL FMRSSLRLQA  60
SDGQLACKVQ RLRRSCGNAA VDMKKKKNEK TNACAGVQKQ AGLTTLT
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26713587