PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s772912g005
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bZIP
Protein Properties Length: 419aa    MW: 46545.4 Da    PI: 7.5805
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s772912g005genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.83.6e-11163205345
                        XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                        + k  rr+++NReAAr+sR+RKka+i++Le+    L++  ++L
  PDK_30s772912g005 163 DAKTLRRLAQNREAARKSRLRKKAYIQQLETSKMRLSQLEQEL 205
                        67999*************************9777776666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.6E-8161224IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.324163207IPR004827Basic-leucine zipper domain
PfamPF001702.6E-8164205IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-7165207No hitNo description
Gene3DG3DSA:1.20.5.1707.8E-8166209No hitNo description
PROSITE patternPS000360168183IPR004827Basic-leucine zipper domain
PfamPF141442.0E-30251323IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    Send to blast
MALNGSHGCN TAPKALHGGG GHLLLYDIWV MVVRKEQKVP FGFLEGFTGR KRKVQRGAAA  60
RAPEFLWDDP CLLHELHHEF MYAETLNIFP SQPMHVVPTP KGEMSLLSPT SSSSKQSIDL  120
ANPISDDVAA LPEPQTDVKA VVKREGNRKG TASSDQEGPR TPDAKTLRRL AQNREAARKS  180
RLRKKAYIQQ LETSKMRLSQ LEQELQRARA QGLLVGGGGV ISGDQGLAGG NAAAMFDMEY  240
GRWLEDHHRL MCDLRTAVQE HSPDNELRML VQNCLGHYDA MTSLKSIIAR CDVFHLLSGM  300
WKTPAERCFM WIGGFRPSEI IKIALRHTEP LTEQQILGVC GLQQSLHETE EALSQGLEAL  360
YRSLSDTVIS DALNCPSNMA NYMGQMAVAV NKLSALEGFV RQRIIRDECP VDFIMLSVF
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017697822.10.0bZIP transcription factor TGA10-like isoform X3
SwissprotQ52MZ21e-151TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A2H3ZN240.0A0A2H3ZN24_PHODC; bZIP transcription factor TGA10-like isoform X3
STRINGXP_008787290.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27323669
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-120bZIP family protein