PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s776121g001

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

NAC

Protein Properties

Length: 255aa MW: 29112.7 Da PI: 7.2201

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s776121g001	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	108.3	9e-34	12	158	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....................kvka....eekewyfFskrdkkyat 70 p +F+P +elv +yL++++ +++l++ ++ike++iy+++P+d+ + + k++yfF+ r+ ky++ PDK_30s776121g001 12 PSHHFRPFPKELVEFYLRPRLLNQPLPC-QAIKELNIYDFHPRDILGgrekceeiregqikvilegaQ--NgntpAGKHLYFFTLRKMKYPN 100 6679**********************.89**********63467899999998888777541..2333455689******** PP NAM 71 gkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 g+r+ r t+ gyWka+ kd+ + +k+ +++g+kk Lvf++g++ +g++t+W+m+ey++ PDK_30s776121g001 101 GTRPARGTNGGYWKASEKDQIIRDKDAKEIGCKKFLVFHEGHQGNGTRTRWLMQEYTV 158 ******************************************************87 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	35.765	10	183	IPR003441	NAC domain
SuperFamily	SSF101941	2.35E-35	10	183	IPR003441	NAC domain
Pfam	PF02365	7.8E-17	12	157	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence Send to blast
MEEDEGIGNV APSHHFRPFP KELVEFYLRP RLLNQPLPCQ AIKELNIYDF HPRDILGGRE 60 KCEEIREGQI KVILEGAQNG NTPAGKHLYF FTLRKMKYPN GTRPARGTNG GYWKASEKDQ 120 IIRDKDAKEI GCKKFLVFHE GHQGNGTRTR WLMQEYTVKE FWFSTDQNKD ELGALALCEI 180 YLKPTRNQSR DGELQVDEQE VEEEGSPSHS SDNIFADRRV GPRPPPWNNG KDAPVASTSG 240 CPSAFGPIYS HNVRR

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	2e-20	9	158	14	140	Stress-induced transcription factor NAC1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_026656428.1	1e-155	NAC domain-containing protein 83-like
TrEMBL	A0A3Q0HNX7	1e-153	A0A3Q0HNX7_PHODC; NAC domain-containing protein 83-like
STRING	XP_008812618.1	1e-133	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP37531	2	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	3e-27	NAC domain containing protein 50