PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s788811g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family NAC
Protein Properties Length: 273aa    MW: 30338.8 Da    PI: 6.3182
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s788811g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM34.36.7e-11117756128
                NAM  56 kewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                         + +fF++   ky++gk ++r+t  g Wk++ k+ ++ + +g++vg  + L +++g+++     +W+m+ey+l
  PDK_30s788811g001  11 GRSFFFTPI--KYRKGKFRHRSTPGGHWKSKNKKAKIRNGEGRTVGYVQDLCYHHGKER----GKWLMKEYTL 77 
                        456888876..6889999************************************77665....59******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100514.015193IPR003441NAC domain
SuperFamilySSF1019411.83E-12883IPR003441NAC domain
PfamPF023651.4E-71477IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MAGDSILHDD GRSFFFTPIK YRKGKFRHRS TPGGHWKSKN KKAKIRNGEG RTVGYVQDLC  60
YHHGKERGKW LMKEYTLVDD LPKNKRKDRI QGNESRMKSL KVEEATDSES KDMRLHYLSN  120
DWSSSEKPTE DECRQYLKSI AEEPGESNDK IMFMAQKFSK PEQGVGPSEE DGGVFSSKNP  180
QVYIAMQSSH FPSAPATSAG NSIGGDLFAG CNSWIPDTLD NLDLDELLAS LDVPSQTSPS  240
VHAVAPSKEG GSAEAAAYPD VLPDTINESI WMS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029117988.13e-79uncharacterized protein LOC114913486
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2941924
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.14e-10NAC domain containing protein 53