PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s790611g005

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

C2H2

Protein Properties

Length: 153aa MW: 17063.7 Da PI: 9.7956

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s790611g005	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.7	0.0016	42	64	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C C+++F++ L H +H PDK_30s790611g005 42 YECRTCNRRFPTFQALGGHRTSH 64 99**********99998888777 PP
2	zf-C2H2	13.8	0.00017	87	109	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp Cg F+ L H+r+H PDK_30s790611g005 87 HECPVCGLEFPMGQALGGHMRRH 109 79********************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51257	5	1	23	No hit	No description
SuperFamily	SSF57667	2.62E-8	40	109	No hit	No description
Pfam	PF13912	1.2E-11	41	66	IPR007087	Zinc finger, C2H2
SMART	SM00355	0.17	42	64	IPR015880	Zinc finger, C2H2-like
PROSITE profile	PS50157	9.93	42	69	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	44	64	IPR007087	Zinc finger, C2H2
Pfam	PF13912	5.9E-12	86	110	IPR007087	Zinc finger, C2H2
SMART	SM00355	0.059	87	109	IPR015880	Zinc finger, C2H2-like
PROSITE profile	PS50157	9.182	87	114	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	89	109	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 153 aa Download sequence Send to blast
MAGREEGEVE STNLANVLLL LSCNGAKARN IHGIKKPMGR VYECRTCNRR FPTFQALGGH 60 RTSHMRTRFR RDWVEETKKE RKKPRVHECP VCGLEFPMGQ ALGGHMRRHK PTEADEACTG 120 KKAGAGKVLW LDLNLTPSEN DLELTALGLG LAV

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor that may be involved in stress responses. {ECO:0000250}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010920697.2	3e-97	zinc finger protein ZAT12
Swissprot	Q9SLD4	8e-25	ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBL	A0A2H3YAC2	6e-74	A0A2H3YAC2_PHODC; zinc finger protein ZAT11-like
STRING	XP_008794835.1	1e-109	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP501	37	157

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	2e-33	C2H2 family protein