PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s790611g006
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family C2H2
Protein Properties Length: 101aa    MW: 11580.4 Da    PI: 10.2943
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s790611g006genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.4e-053456123
                       EEETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                       ++Cp Cg  F+    L  H+r+H
  PDK_30s790611g006 34 HECPVCGLEFPMGQALGGHMRRH 56
                       79********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.09E-53159No hitNo description
PfamPF139122.9E-123357IPR007087Zinc finger, C2H2
PROSITE profilePS501579.1823461IPR007087Zinc finger, C2H2
PROSITE patternPS0002803656IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    Send to blast
MGGDKKWKKK KRTNRFRRDW VEETKKERKK PRVHECPVCG LEFPMGQALG GHMRRHKPTE  60
ADEACTGKKA GAGKKMEEEE KNKQACAGVE RLGCSEVLLF H
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010920697.21e-33zinc finger protein ZAT12
TrEMBLA0A2H3YAC23e-21A0A2H3YAC2_PHODC; zinc finger protein ZAT11-like
STRINGXP_008794835.11e-36(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50137157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46080.11e-12C2H2 family protein