PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s804031g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bHLH
Protein Properties Length: 173aa    MW: 19821.8 Da    PI: 6.2612
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s804031g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.70.000122183955
                       TCHHHHHHHHHHHHHHH CS
                HLH 39 sKaeiLekAveYIksLq 55
                       +Ka+i + A++YI++Lq
  PDK_30s804031g001  2 DKASIIKDAIDYIQELQ 18
                       8***************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.81E-4122No hitNo description
SuperFamilySSF474595.89E-5142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-5135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508888.626117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MDKASIIKDA IDYIQELQGL ERKLLSKVSD LEVSNAFLEI IHDIEQDDVY HTQRKGKRTL  60
RNPPLAPGSP FMPSIEVLEL RVSAVENKTL VVNFTCKKKT TDTLTKMCEV FESLNLKIIT  120
ANIASNSGSL SYTLFVEVDW WNCSILFYVI GHDYNSYGFF FRLTGGTIRF YFM
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008789721.23e-96transcription factor bHLH35-like
TrEMBLA0A2H3XWT47e-95A0A2H3XWT4_PHODC; transcription factor bHLH35-like
STRINGXP_008789721.15e-95(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP104438133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.11e-20bHLH family protein