PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s814541g003
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family G2-like
Protein Properties Length: 255aa    MW: 27997.7 Da    PI: 6.1654
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s814541g003genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like53.45.7e-1740702656
            G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRla 56
                       +AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  PDK_30s814541g003 40 VATPKQIRELMKVDGLTNDEVKSHLQKYRLH 70
                       7****************************97 PP
2G2-like38.32.9e-121802062652
            G2-like  26 kAtPktilelmkvkgLtlehvkSHLQk 52 
                        +AtPk+i+elmk +gLt+++vkSHLQ 
  PDK_30s814541g003 180 VATPKQIRELMKGDGLTNDEVKSHLQE 206
                        7*************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015574.1E-143970IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.608.5E-154073IPR009057Homeodomain-like
SuperFamilySSF466895.11E-74073IPR009057Homeodomain-like
TIGRFAMsTIGR015573.0E-10179207IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.604.6E-9180211IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MKLLLVTIGD KGTPRYLQFP VIRTAQFRSF DLIEVSLDAV ATPKQIRELM KVDGLTNDEV  60
KSHLQKYRLH TRRVPNASAA VNHPVVVMGD LWVPQEHYSA SQKSASQSGS PQTPLQLAVK  120
ISDAELEFLI GEDSVEDEVA VKLLLVTIGN KGTPRYLQFP VIRTAQFRSF DLIEVSLDAV  180
ATPKQIRELM KGDGLTNDEV KSHLQEHYSA SQKSASQSGS PQTPLQLAGA GHTISITAGD  240
SCEEEDGKSE SCSWK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026659986.18e-78uncharacterized protein LOC113462643
TrEMBLA0A3Q0HZG02e-76A0A3Q0HZG0_PHODC; uncharacterized protein LOC113462643
STRINGXP_008792690.13e-45(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP55823353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13300.14e-22G2-like family protein