PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s816181g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family WRKY
Protein Properties Length: 160aa    MW: 18318.8 Da    PI: 6.5083
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s816181g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY65.49.2e-21465259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SS.STTEEEEEEES--SS- CS
               WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversae.dpkvveitYegeHnhe 59
                        Dgy+WrKYGqK++ gs++ rsYY+C  +   gC+++k+v+++++ +p  +++tY+  H+++
  PDK_30s816181g001  4 ADGYQWRKYGQKKIYGSKYQRSYYKCLRRkdqGCQATKQVQQKDDgNPPKFTVTYQMPHTCK 65
                       7*************************9887889*******9877427789**********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081117.488162IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.0E-22266IPR003657WRKY domain
SuperFamilySSF1182908.5E-20265IPR003657WRKY domain
SMARTSM007742.8E-27366IPR003657WRKY domain
PfamPF031061.6E-23565IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MPMADGYQWR KYGQKKIYGS KYQRSYYKCL RRKDQGCQAT KQVQQKDDGN PPKFTVTYQM  60
PHTCKNLDIT SQVGMDSGLA ETSVLDNGSK SLDIQPQQPL QSEILKMEEP EKRLFTDLAS  120
MHSPMLFDDM NLIMGMTGLD GWCISNEEAP WFQFPSDARG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-13365869OsWRKY45
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008782667.11e-118probable WRKY transcription factor 46
TrEMBLA0A2H3XEU51e-117A0A2H3XEU5_PHODC; probable WRKY transcription factor 46
STRINGXP_008782667.11e-118(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50452663
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.21e-18WRKY family protein