PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s826431g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family HB-other
Protein Properties Length: 174aa    MW: 19031.2 Da    PI: 4.4462
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s826431g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox38.52e-121291572856
                        HHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
           Homeobox  28 eereeLAkklgLterqVkvWFqNrRakek 56 
                        +++  LAk+l+L  rqV vWFqNrRa+ek
  PDK_30s826431g001 129 KQKLALAKQLNLRPRQVEVWFQNRRAREK 157
                        57789***********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003890.006395163IPR001356Homeobox domain
CDDcd000861.79E-9117157No hitNo description
SuperFamilySSF466893.81E-10129158IPR009057Homeodomain-like
PfamPF000463.9E-10129157IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.2E-11129157IPR009057Homeodomain-like
PROSITE profilePS5007112.568129159IPR001356Homeobox domain
PROSITE patternPS000270134157IPR017970Homeobox, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MELGLSLGEA PSKAMYTAEK AGVKASGGLG LGFGMGLGVG LGGREEEEEE GRRVEEEEEE  60
EEERDGGEER GSADHPVQLN LLPLVPVPRR SSSQLGFPGV PETRENLEVS ARGLDVNQAP  120
SAEEEGVVKQ KLALAKQLNL RPRQVEVWFQ NRRAREKENA DTVHTSQILL FFLI