PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s826981g003
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family NAC
Protein Properties Length: 205aa    MW: 23693.9 Da    PI: 9.512
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s826981g003genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM156.89.2e-49111373128
                NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                        pGfrFhPt+eel+++yL++ v gkkl++ ++i ++++y+++Pw+Lp  ++ +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d+++ s
  PDK_30s826981g003  11 PGFRFHPTEEELLDFYLRRVVLGKKLNF-DIIGTLNLYRYDPWELPGLANIGEREWYFFVPRDRKSGNGGRPNRTTERGFWKATGSDRQIRS 101
                        9*************************99.99***************8888899**************************************9 PP

                NAM  95 k..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        +   ++l+glkktLvfy+grap+g+ktdWvm+eyrl
  PDK_30s826981g003 102 AadPKRLIGLKKTLVFYQGRAPRGTKTDWVMNEYRL 137
                        8777788***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100551.1599163IPR003441NAC domain
SuperFamilySSF1019419.42E-5410143IPR003441NAC domain
PfamPF023651.6E-2511137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MEGGGSELDL PGFRFHPTEE ELLDFYLRRV VLGKKLNFDI IGTLNLYRYD PWELPGLANI  60
GEREWYFFVP RDRKSGNGGR PNRTTERGFW KATGSDRQIR SAADPKRLIG LKKTLVFYQG  120
RAPRGTKTDW VMNEYRLPDT PHSTANSIPP KKEVEVTSTS VRQVNLPGID VPKYSPDCWL  180
QDPFLTQMRS PWLDQWSPYA NLLNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A8e-48613711140Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008791987.11e-109NAC domain-containing protein 22-like
SwissprotQ10S656e-86NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A2H3Y1W81e-108A0A2H3Y1W8_PHODC; NAC domain-containing protein 22-like
STRINGXP_008791987.11e-109(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP177038105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-75NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]