PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s830191g001

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

BES1

Protein Properties

Length: 150aa MW: 15670.5 Da PI: 4.1755

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s830191g001	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	57.7	5.3e-18	1	110	47	134
DUF822 47 nneVlkALcreAGwvvedDGttyr..............kgskpl....eeaeaagssasaspesslq.sslkssalaspvesysaspksssf 119 +n+Vl+AL+reAGw+ve+DGttyr + + + +s+es+l+ +slk+s++++ ++s+++ ++ +++ PDK_30s830191g001 1 MNDVLAALAREAGWIVEPDGTTYRpssvspspsvavaaP----AphppPPPTQLAPFPVRSIESPLStNSLKNSSMKASLDSQASLLRIDES 88 7*********************766555555544221....12233566677778889**999******************* PP DUF822 120 pspssldsislasa.......a 134 +sp+slds+ +a+ a PDK_30s830191g001 89 LSPASLDSVVVAERdargekcA 110 *******9998744443333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	5.0E-19	1	115	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 150 aa Download sequence Send to blast
MNDVLAALAR EAGWIVEPDG TTYRPSSVSP SPSVAVAAPA PHPPPPPTQL APFPVRSIES 60 PLSTNSLKNS SMKASLDSQA SLLRIDESLS PASLDSVVVA ERDARGEKCA NASPINSPEC 120 VEADQLMRDS AEGEGGFGET PYIPVYAMLP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008803967.1	1e-102	beta-amylase 8-like
Swissprot	Q9FH80	3e-34	BAM8_ARATH; Beta-amylase 8
TrEMBL	A0A2H3YUE3	1e-101	A0A2H3YUE3_PHODC; beta-amylase 8-like
STRING	XP_008803966.1	4e-78	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2141	36	63

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45300.1	1e-32	beta-amylase 2

Publications ? help Back to Top
Soyk S, et al. The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation. Plant Cell, 2014. 26(4): p. 1746-1763 [PMID:24748042]