PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s839411g024
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family WRKY
Protein Properties Length: 453aa    MW: 50169.5 Da    PI: 8.6249
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s839411g024genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY85.83.8e-27115170359
                        -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                        D ynWrKYGqK+vk+se+ rsYY+C++a+C+vkkkve+++ d++v+ei+Y+g Hnhe
  PDK_30s839411g024 115 DDYNWRKYGQKQVKNSENIRSYYKCAHADCSVKKKVECCR-DGRVTEIVYRGCHNHE 170
                        99**************************************.***************8 PP
2WRKY55.61.1e-173183562159
                        -EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY  21 prsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         rsYYrCt+ gCpv+k+ve+s+ed k ++itYeg+Hnh+
  PDK_30s839411g024 318 IRSYYRCTHIGCPVRKHVEKSSEDVKSMVITYEGKHNHD 356
                        59************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.1E-25106172IPR003657WRKY domain
PROSITE profilePS5081119.405108172IPR003657WRKY domain
SuperFamilySSF1182908.63E-22112172IPR003657WRKY domain
SMARTSM007741.6E-27113171IPR003657WRKY domain
PfamPF031062.1E-20115170IPR003657WRKY domain
SuperFamilySSF1182905.23E-14317358IPR003657WRKY domain
PfamPF031063.7E-12318356IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.4E-16318358IPR003657WRKY domain
SMARTSM007741.7E-9318357IPR003657WRKY domain
PROSITE profilePS5081120.461319358IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
MEDAEALQQQ QQQQQKILGQ FAMTHQAVLA SVTAQALMQL QKEYPSSSSE FLRNSVPQPQ  60
VSNVTQLPSQ GPLPVAGNNA CAPETELPPS SPQKPQSNSI VVKTSFDDEK ASSGDDYNWR  120
KYGQKQVKNS ENIRSYYKCA HADCSVKKKV ECCRDGRVTE IVYRGCHNHE PPLKVRGFRE  180
RKSKCGASSV VNKNLDLPGT ELKEAVPSAS KLQQSSGNET FEQELPCSHD REGDSGVKTE  240
EDLGDKPDPK RRQEFKWVEY NYERLSIQAW LILVKKVAKE IGKSADKCSG IAKALPLPKN  300
CKKRRSFPIV SSVRRLMIRS YYRCTHIGCP VRKHVEKSSE DVKSMVITYE GKHNHDLPSL  360
KDGSDPPASA LLTAAATAVT NYEQTQKNDP LSYGTPTTKW LPDVDGKIIN ERAQELGGEK  420
AIESAQTLLI MGLSSTSENV GSKNSEGARF QGI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-133193583574WRKY transcription factor 1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008794350.10.0probable WRKY transcription factor 3
TrEMBLA0A2H3Y7J10.0A0A2H3Y7J1_PHODC; probable WRKY transcription factor 3
STRINGXP_008794350.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP58203455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.14e-47WRKY DNA-binding protein 3