PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s849051g001

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

NAC

Protein Properties

Length: 241aa MW: 28014.8 Da PI: 8.1626

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s849051g001	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	155.8	1.9e-48	10	137	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 pGfrFhPt+eel+++yLk+ + gkkl++ ++i ++++y+++Pw+Lp +k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d+++ PDK_30s849051g001 10 LPGFRFHPTEEELLDFYLKRVALGKKLNF-DIIGTLNLYRHDPWELPGLAKIGEREWYFFVPRDRKSGNGGRPNRTTERGFWKATGSDRPIR 100 59***********************99.99***********8888899********************************** PP NAM 94 sk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 s+ ++l+glkktLvfy+grap+g+ktdWvm+eyrl PDK_30s849051g001 101 STaePRRLIGLKKTLVFYEGRAPRGTKTDWVMNEYRL 137 98666778*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	55.984	9	161	IPR003441	NAC domain
SuperFamily	SSF101941	3.01E-58	9	161	IPR003441	NAC domain
Pfam	PF02365	5.2E-25	11	137	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009965	Biological Process	leaf morphogenesis
GO:0010200	Biological Process	response to chitin
GO:0045792	Biological Process	negative regulation of cell size
GO:0048281	Biological Process	inflorescence morphogenesis
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence Send to blast
MERSGSEPAL PGFRFHPTEE ELLDFYLKRV ALGKKLNFDI IGTLNLYRHD PWELPGLAKI 60 GEREWYFFVP RDRKSGNGGR PNRTTERGFW KATGSDRPIR STAEPRRLIG LKKTLVFYEG 120 RAPRGTKTDW VMNEYRLPDA PASNTAVPPK EDIVLCKIYR KATSLKELEQ RAAMEEGLRE 180 SQACMFMVDN ASSDDQENYQ MNLPDLQVPK YSLDWMQDPL STQLRSPWLD QWFPYANLPY 240 F

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	2e-50	11	167	19	171	NO APICAL MERISTEM PROTEIN
1ut4_B	2e-50	11	167	19	171	NO APICAL MERISTEM PROTEIN
1ut7_A	2e-50	11	167	19	171	NO APICAL MERISTEM PROTEIN
1ut7_B	2e-50	11	167	19	171	NO APICAL MERISTEM PROTEIN
3swm_A	2e-50	11	167	22	174	NAC domain-containing protein 19
3swm_B	2e-50	11	167	22	174	NAC domain-containing protein 19
3swm_C	2e-50	11	167	22	174	NAC domain-containing protein 19
3swm_D	2e-50	11	167	22	174	NAC domain-containing protein 19
3swp_A	2e-50	11	167	22	174	NAC domain-containing protein 19
3swp_B	2e-50	11	167	22	174	NAC domain-containing protein 19
3swp_C	2e-50	11	167	22	174	NAC domain-containing protein 19
3swp_D	2e-50	11	167	22	174	NAC domain-containing protein 19
4dul_A	2e-50	11	167	19	171	NAC domain-containing protein 19
4dul_B	2e-50	11	167	19	171	NAC domain-containing protein 19
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008813634.1	1e-174	NAC domain-containing protein 22-like isoform X1
Swissprot	Q10S65	1e-105	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A2H3ZGV2	1e-172	A0A2H3ZGV2_PHODC; NAC domain-containing protein 22-like isoform X1
STRING	XP_008813634.1	1e-173	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1770	38	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	2e-90	NAC domain containing protein 36

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]