PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s854791g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family WRKY
Protein Properties Length: 176aa    MW: 19677.8 Da    PI: 4.6306
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s854791g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY46.95.5e-151382359
                       EEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY 23 sYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                       +YY+C+++ gC++kk+vers++d ++++itY+++Hnh 
  PDK_30s854791g001  1 GYYKCSTSkGCSAKKQVERSKTDSSLLIITYTSDHNHA 38
                       5****9988****************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007742.7E-7139IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.2E-14139IPR003657WRKY domain
PROSITE profilePS5081118.303140IPR003657WRKY domain
PfamPF031061.1E-11137IPR003657WRKY domain
SuperFamilySSF1182904.97E-11240IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
GYYKCSTSKG CSAKKQVERS KTDSSLLIIT YTSDHNHAGP HLPSLCPQEP SPQSQSIINQ  60
DLPIPKSPSQ PNTTSEESLS KEKSPPPFPP QRPQEVSQQN QPREAVHDHQ LNILFDEEDP  120
LPSPNSMTAP KTDGENDFFD ELEELPVPSS LTSLVRESFF DERILFLPSR TTFSLM
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008797453.11e-123probable WRKY transcription factor 14
TrEMBLA0A2H3YEJ61e-122A0A2H3YEJ6_PHODC; probable WRKY transcription factor 14
STRINGXP_008797453.11e-123(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP149121821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.13e-16WRKY DNA-binding protein 35