PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s867271g011
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bHLH
Protein Properties Length: 235aa    MW: 26266.5 Da    PI: 9.9921
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s867271g011genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.25.4e-12165209755
                        HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +Er RR ri +++ +L++ +P+     +k  + a++L +Av++IksLq
  PDK_30s867271g011 165 VAERERRTRISEKLKKLQDFVPNM----DKQTNTADMLDLAVQHIKSLQ 209
                        78*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.189158208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.58E-15161218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.88E-11162213No hitNo description
Gene3DG3DSA:4.10.280.101.1E-13163214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.7E-13164214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.2E-9165209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010119Biological Processregulation of stomatal movement
GO:0005829Cellular Componentcytosol
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MRTLRLKREE YVRIRAGLSV TRDTGSYSQP GADGVYAMPS RRFSSQLSFS RQGTLSQISE  60
ISIPDTGESV SGSNNSNETS RNVGQSYISS NLSIGSWDDI NSIMFSAPPS KQAKNHNGDI  120
ITRLSSIESQ FSLPTSSSEF LQIQQDQAPF KTRAKRGCAT HPRSVAERER RTRISEKLKK  180
LQDFVPNMDK QTNTADMLDL AVQHIKSLQS QVQCVRECFA FRILACGHSV QRIEL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008791728.11e-140transcription factor bHLH128 isoform X2
TrEMBLA0A2H3Y1141e-139A0A2H3Y114_PHODC; transcription factor bHLH128 isoform X2
STRINGXP_008791727.11e-138(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP70713752
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.19e-41bHLH family protein