PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s881851g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family C2H2
Protein Properties Length: 142aa    MW: 15637 Da    PI: 10.3292
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s881851g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.10.00133153123
                       EEETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                       ++C+ C+++Fs+   L  H  +H
  PDK_30s881851g001 31 FECKTCSRRFSSFQALGGHRTSH 53
                       89**********99998888777 PP
2zf-C2H217.11.5e-057698123
                       EEETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                       ++C++Cg++Fs    L  H+r+H
  PDK_30s881851g001 76 HQCSICGQRFSMGQALGGHMRRH 98
                       79********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139124.5E-123055IPR007087Zinc finger, C2H2
SuperFamilySSF576672.23E-83098No hitNo description
SMARTSM003550.423153IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.3053158IPR007087Zinc finger, C2H2
PROSITE patternPS0002803353IPR007087Zinc finger, C2H2
PfamPF139124.9E-1175100IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.28476103IPR007087Zinc finger, C2H2
SMARTSM003550.0227698IPR015880Zinc finger, C2H2-like
Gene3DG3DSA:3.30.160.603.6E-47698IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE patternPS0002807898IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    Send to blast
MKTANLLLSL SCGGNKPEKI RRRTKTEDGV FECKTCSRRF SSFQALGGHR TSHKQPRLQG  60
LGFAPTKGST LKTNVHQCSI CGQRFSMGQA LGGHMRRHKP PSEAFPEKKA GVEKSMPDLN  120
VLPLEDDCSR EGSHGVLLEL FV
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008788150.11e-101zinc finger protein ZAT11-like
SwissprotQ9SLD42e-24ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBLA0A2H3XSQ11e-99A0A2H3XSQ1_PHODC; zinc finger protein ZAT11-like
STRINGXP_008788150.11e-100(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50137157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53600.15e-27C2H2 family protein