PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s889471g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family BES1
Protein Properties Length: 251aa    MW: 26840.9 Da    PI: 8.4994
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s889471g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822200.74.5e-6241232117
             DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl...eeaeaagssasasp 90 
                        g+gr ptw+ErEnnkrRERrRRaiaaki++GLR  Gnyklpk++DnneVlkALc eAGwvvedDGttyrkg+kpl    ea+a+g+s+++sp
  PDK_30s889471g001   4 GGGRLPTWRERENNKRRERRRRAIAAKIFSGLRTLGNYKLPKHCDNNEVLKALCSEAGWVVEDDGTTYRKGCKPLpspPEAAAGGQSTNISP 95 
                        89************************************************************************99777788999******* PP

             DUF822  91 esslq.sslkssalaspvesysaspkss 117
                        +ss++ +s+ ss+++spv+sy+asp+s+
  PDK_30s889471g001  96 CSSSHhLSPPSSSFPSPVPSYHASPSSK 123
                        ****99******************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.7E-594122IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MTSGGGRLPT WRERENNKRR ERRRRAIAAK IFSGLRTLGN YKLPKHCDNN EVLKALCSEA  60
GWVVEDDGTT YRKGCKPLPS PPEAAAGGQS TNISPCSSSH HLSPPSSSFP SPVPSYHASP  120
SSKPDWDYAA FRHPLFAASA PASPTRGRHH GHPATIPECD ESDASTVDSG RWVSFQMTAP  180
ASPTFNLVNP VAQMPETVVG PGGGGMSDRG RGGVEFEFGN GRVKPWVGER IHEVGVEDLE  240
LTLGVGSSGS K
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A3e-26779372444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B3e-26779372444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C3e-26779372444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D3e-26779372444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPositive brassinosteroid-signaling protein. Mediates downstream brassinosteroid-regulated growth response and feedback inhibition of brassinosteroid biosynthetic genes. May act as transcriptional repressor by binding the brassinosteroid-response element (5'-CGTGCG-3') in the promoter of GRAS32 (AC Q9LWU9), another positive regulator of brassinosteroid signaling (By similarity). {ECO:0000250}.
UniProtPositive brassinosteroid-signaling protein. Mediates downstream brassinosteroid-regulated growth response and feedback inhibition of brassinosteroid (BR) biosynthetic genes (PubMed:17699623, PubMed:19220793). May act as transcriptional repressor by binding the brassinosteroid-response element (BREE) (5'-CGTG(T/C)G-3') in the promoter of DLT (AC Q9LWU9), another positive regulator of BR signaling (PubMed:19220793). Acts as transcriptional repressor of LIC, a negative regulator of BR signaling, by binding to the BRRE element of its promoter. BZR1 and LIC play opposite roles in BR signaling and regulation of leaf bending (PubMed:22570626). {ECO:0000269|PubMed:17699623, ECO:0000269|PubMed:19220793, ECO:0000269|PubMed:22570626}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Down-regulated by 24-epibrassinolide. {ECO:0000269|PubMed:22570626}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1067482e-65AK106748.1 Oryza sativa Japonica Group cDNA clone:002-115-C06, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008795632.11e-120protein BZR1 homolog 1
SwissprotB8B7S51e-85BZR1_ORYSI; Protein BZR1 homolog 1
SwissprotQ7XI961e-85BZR1_ORYSJ; Protein BZR1 homolog 1
TrEMBLA0A2H3Y9V81e-119A0A2H3Y9V8_PHODC; protein BZR1 homolog 1
STRINGXP_008795632.11e-119(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54743453
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.23e-35BES1 family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Tong H, et al.
    DWARF AND LOW-TILLERING acts as a direct downstream target of a GSK3/SHAGGY-like kinase to mediate brassinosteroid responses in rice.
    Plant Cell, 2012. 24(6): p. 2562-77
    [PMID:22685166]