PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s896481g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family ERF
Protein Properties Length: 127aa    MW: 13707.5 Da    PI: 10.8167
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s896481g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2452.7e-142265249
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49
                       +ykG r+++ +g+Wv+eIr p   g rkr +lg++ t++ Aa+a++a+
  PDK_30s896481g001 22 KYKGARRRR-WGKWVSEIRIP---GSRKRLWLGSYSTPQAAAAAYDAM 65
                       799*99776.**********8...435*******************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.107.0E-232281IPR001471AP2/ERF domain
SuperFamilySSF541713.73E-152281IPR016177DNA-binding domain
CDDcd000181.21E-182282No hitNo description
PROSITE profilePS5103219.1772280IPR001471AP2/ERF domain
SMARTSM003805.0E-242286IPR001471AP2/ERF domain
PfamPF008473.0E-82265IPR001471AP2/ERF domain
PRINTSPR003679.1E-82334IPR001471AP2/ERF domain
PRINTSPR003679.1E-84561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    Send to blast
MRRSEGYASP GSTGRAAGKE IKYKGARRRR WGKWVSEIRI PGSRKRLWLG SYSTPQAAAA  60
AYDAMFLLRG PSSSSSLNFP DHVPFSGWVV MSPESIQRAA SDSGKAVDAQ LISMEAAGEH  120
GGLSYGK
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008786563.11e-81ethylene-responsive transcription factor ERF019
SwissprotO805426e-30ERF19_ARATH; Ethylene-responsive transcription factor ERF019
TrEMBLA0A2H3XNZ02e-80A0A2H3XNZ0_PHODC; ethylene-responsive transcription factor ERF019
STRINGXP_008786563.14e-81(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP64332951
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.16e-30ERF family protein
Publications ? help Back to Top
  1. Scarpeci TE,Frea VS,Zanor MI,Valle EM
    Overexpression of AtERF019 delays plant growth and senescence, and improves drought tolerance in Arabidopsis.
    J. Exp. Bot., 2017. 68(3): p. 673-685
    [PMID:28204526]