PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s899671g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family MYB_related
Protein Properties Length: 151aa    MW: 16813.6 Da    PI: 5.9126
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s899671g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.61.4e-081242448
                       HHHHHHHHTTTS-HHHHHHHHHHHT CS
    Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48
                       W++Ia +++ gRt++++k++w+++l
  PDK_30s899671g001  1 WSLIAGRLP-GRTDNEVKNYWNSHL 24
                       *********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd001671.16E-6124No hitNo description
Gene3DG3DSA:1.10.10.606.4E-12138IPR009057Homeodomain-like
SuperFamilySSF466891.63E-7134IPR009057Homeodomain-like
PROSITE profilePS5129417.177128IPR017930Myb domain
PfamPF002492.8E-6124IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
WSLIAGRLPG RTDNEVKNYW NSHLRRKLIN MGIDPNNHHV SQTLSLHRPQ SSGNETLVGG  60
PVNHERKEWR PLISTTDNDR LSDTASCLPP KKDSASSLED NTNVLPDLNL DPTMSVPSPS  120
TTLTEWNQES AELEAPSDLG NATNHTLLLF R
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008806257.11e-105transcription factor MYB8-like
TrEMBLA0A2H3YZP51e-103A0A2H3YZP5_PHODC; transcription factor MYB8-like
STRINGXP_008806257.11e-104(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP11637448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.12e-19myb domain protein 4