PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s907751g001

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

Nin-like

Protein Properties

Length: 247aa MW: 28048 Da PI: 6.254

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s907751g001	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	50.9	3.1e-16	183	228	2	47
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhR 47 +k+++ e+l++y + p AA++L++++T+ K+ CR++G++RWP+ PDK_30s907751g001 183 TKNMTREELEQYTDFPRDRAARKLNLSVTTFKKLCRKHGMRRWPYK 228 89******************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	14.129	173	247	IPR003035	RWP-RK domain
Pfam	PF02042	2.3E-15	185	229	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence Send to blast
MDNSEHYDPD HGDTHRHLNS PEPPLDPLIT SWSSFLWEYE SFSPSPPPVP NNDFGLASYQ 60 TAAPVQENVP SRNLHSSEPP LDPQITSWPS FLRKDESFPP PPPPVPNNDF GLTSYQAAAP 120 VQENEPSRTV DNTKSLIGES DLLPETDFGG SSQLGSGYVT GTEGRGGLTG SKKTGLAAQR 180 ERTKNMTREE LEQYTDFPRD RAARKLNLSV TTFKKLCRKH GMRRWPYKRP DWQRIQSFTW 240 RLYRLDY

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_026657665.1	2e-74	uncharacterized protein LOC113461822, partial
TrEMBL	A0A3Q0HWD8	5e-73	A0A3Q0HWD8_PHODC; uncharacterized protein LOC113461822

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66990.1	6e-09	RWP-RK domain-containing protein