PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s909061g006
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bZIP
Protein Properties Length: 399aa    MW: 41989 Da    PI: 7.7117
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s909061g006genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_171.51.2e-22287349163
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL+++v++L++eN+ L+ e++++kk +++l +++
  PDK_30s909061g006 287 ERELKRQRRKQSNRESARRSRLRKQAECEELARRVDALKEENTCLRAEVDRIKKDYEQLLAQN 349
                        89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.2E-33198IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165965.3E-38137259No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-15284348No hitNo description
SMARTSM003386.1E-22287351IPR004827Basic-leucine zipper domain
PfamPF001703.9E-21287349IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.208289352IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-11290346No hitNo description
CDDcd147021.04E-22292342No hitNo description
PROSITE patternPS000360294309IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    Send to blast
MGSSETDTPS KAPKASAAQE QPPATSASPT TTVYPDWSGF QAYSPIPPHG FFHSPVASSP  60
QAHPYMWGAQ HLMPSYGTPP SPYVMYPHGG LYAHPSIPAG SHPFSPFAVP SANGNPDASG  120
AVAGGMEGDG KSSEGKERSP IKRSRGSLGS LNMITGKNNN DLGKTSRAAN GVFSQSSESG  180
SEGSSDGSDA NSQNASQNGT TTRGSQNGVA RAPTQATSSQ TIPIMPMPVA GVHGGVAGPT  240
TNLNIGMDYW NTSTPSPMPP IRGKAPAATG AGAMVPGGLS GSRENDEREL KRQRRKQSNR  300
ESARRSRLRK QAECEELARR VDALKEENTC LRAEVDRIKK DYEQLLAQNA SLKEKLEETT  360
KGSEDTRLDE NSQHSVDDTQ KHSDSVVKAG QSDTVPSGC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1303309RRSRLRK
2303310RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008788461.10.0bZIP transcription factor 16-like isoform X1
RefseqXP_008788476.10.0bZIP transcription factor 16-like isoform X1
RefseqXP_008788484.10.0bZIP transcription factor 16-like isoform X1
RefseqXP_026660320.10.0bZIP transcription factor 16-like isoform X2
SwissprotB6E1071e-139BZP1B_WHEAT; bZIP transcription factor 1-B
TrEMBLA0A2H3XT880.0A0A2H3XT88_PHODC; bZIP transcription factor 16-like isoform X1
TrEMBLA0A3Q0I3Q40.0A0A3Q0I3Q4_PHODC; bZIP transcription factor 16-like isoform X2
STRINGXP_008788461.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-111basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Appels R, et al.
    Shifting the limits in wheat research and breeding using a fully annotated reference genome.
    Science, 2018.
    [PMID:30115783]